Flight school

Our research on hummingbird flight is featured in the July 2017 National Geographic!

The article is all about hummingbird science, and how new techniques are allowing us to see aspects of their behaviour that aren’t available to the unaided eye. You can read the print article here, see a beautiful video summary here, and another one here. Here’s one of an Anna’s hummingbird in a wind tunnel. He’s remarkably good at keeping his head steady as the wind ramps up:

The photographer, Anand Varma, took a great shot of my vision experiments at UBC that shows a bird perching in a strange, Tron-like environment of glowing green stripes:

Hummingbird in the virtual reality flight tunnel

Photography and video by Anand Varma in National Geographic.

Between getting the scene right, adjusting the lighting, and then waiting for the bird to act in just the right way, this one photograph took an entire week of work (hands on work that is, no photoshop!). Given all the other complex shorts in the article, it’s easy to see how the whole endeavour took a couple of years – much like a scientific study. Working with Anand that week, it was interesting to see how many other parallels there are between what he does and our research. A lot of trial and error, a lot of patience, and a lot of coping with the quirks and surprises of animal behaviour.

The article ends with a scene from the summer when the writer, Brendan Borrell, spent a couple of days with me in the lab. I have the honour of being described as emerging from the lab with a “sheen of sweat” on my forehead. It is embarrassing, but true! It was a hot day and we were working hard in that room.

There is also a nice editorial about the project here.

Bird-inspired drones

This Christmas the strong winds decorated the trees with shiny new drones:

(photo by Rod Croskery)

Drones of the future are going to get a lot more maneuverable.

A group at Imperial College London has now built an aquatic diving drone with wings that can tuck in for protection during rapid plunges, inspired by the hunting behaviour of seabirds in the family Sulidae (gannets and boobies).

And a Swiss team has developed a drone with feather-like elements that allow the wing to fold into a range of configurations, analogous to the way birds can overlap their wing feathers. This allows the drone’s wings to be adjusted to suit the conditions – reducing wing area in strong winds, for example.

These advances should make it possible for drones to maneuver in a greater range of tough-to-access environments, just like birds.

Both studies are published in a new issue of Royal Society Interface Focus:

Siddall et al. Wind and water tunnel testing of a morphing aquatic micro air vehicle.

Di Luca et al. Bioinspired morphing wings for extended flight envelope and roll control of small drones.

Animating time series in R

Frame-blending is a great way to illustrate animal behaviour and other things that change over time. This got me thinking about ways to animate time series data. In R, the animation package has lots of options, but you can also build your own just by plotting over the same device window. If you save each iteration in a loop, the resulting images can be used as frames in a video or gif.

Hummingbirds deviate away from vertical stripe patterns

 Click the image to see a larger version

Here is an example using recordings that track hummingbirds flying in our tunnel here at UBC. This animation shows a bird’s eye view of 50 flights by 10 birds. In half of the flights (the red ones), the birds had horizontal stripes on their left side and vertical stripes on their right, and the other half (blue) had the reverse. The subtle difference between the red and blue trajectories (red ones tend to have more positive y values) shows that on average, birds tend to deviate away from vertical stripes, and towards horizontal ones. The histogram that builds up on the right side of the figure shows the mean lateral (y) position for each trajectory as it finishe

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Species of serendipity

Like most ideas, this one arrived in the shower. I needed to write a post for this week, but my list of topics was wearing thin and the weather is finally starting to get nice enough to distract me. Sure, I had a few promising ideas lined up, but they all need more time to develop. Plus I had a DVD to watch: a Nature of Things episode on serendipity in science due back at the library. Then it hit me – of course! I’ll watch the episode and then write about that.

Serendipity – supposedly one of the top ten most untranslatable words in the English language – was coined in the 1700s by Horace Walpole as a play on the tile of a Persian fairy tale. The Three Princes of Serendip takes place in Sri Lanka. It follows the adventures of three brothers exiled from the island by their father the king, in hopes that his sons might achieve a more worldly education. In the course of their travels, the princes go on to solve many mysteries – like unintentionally tracking down a lost camel on scant evidence – thanks to their sagacity and a series of lucky accidents.

Since Walpole, the word has taken on a close association with Eureka moments in science, starting with Archimedes’ famous bath. Supposedly, the ancient Greek mathematician solved the problem of measuring the volume of irregular objects after noticing how his own body displaced water in the tub.

Scientists have taken a great interest in tracking serendipity, perhaps because it seems to play a role in research success. Wikipedia has an extensive list of celebrated examples, from Viagra to chocolate chip cookies. Many have looked for ways to encourage this kind of scholarly luck. For instance, after his Nobel prize winning work on viruses, the molecular biologist Max Delbrück is perhaps best known for coming up with the principle of limited sloppiness: researchers should be careless enough that unexpected things can happen, but not so sloppy that they can’t reproduce them when they do. Alexander Fleming had this advantage when he discovered penicillin. He first noticed its antibiotic effects in a stack of dirty culture dishes that he hadn’t bothered to clean before leaving for summer vacation.

So how do people study something that is by definition rare and unusual? Psychology Today has summed up some of the latest research on luck, most of it based on surveys of people who claim to be especially serendipitous1. Not surprisingly, they are more competent, confident and willing to take risks than the rest of us. They are also more extroverted and less neurotic than most. Being born in the summer apparently helps as well – especially May.

Other advice might be more practical.

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Quirks, quarks and quantum sailboats

An old mystery from my days as a sailor resurfaced this week. Does air on one side of the sail somehow know what the air on the other side is doing? Sounds strange, but it happens to be a key part of explaining how boats, birds and airplanes work, and it stumps a whole lot of people who should probably know better – including most pilots.

I was reminded of this by Bob McDonald from CBC’s Quirks and Quarks radio show. He was in town to give a talk on “The Science of Everyday Life”. It was clear that this was going to be a show for kids, but I dragged Charlie along for two reasons. First, I was planning on presenting some of my peacock research at a family science festival on Saturday; I thought it might be useful to see a master of this sort of thing in action. Fandom came into it too – the Quirks show is one of a handful of radio programs that got me through my troglobite period of 8 hour days in the darkroom last summer.

I was pretty sure what we were in for – baking soda and vinegar magic for the edification of the grade school set – but I wasn’t prepared for how quickly McDonald would put me under his spell, too. Sitting there cold and hungry in the dingy auditorium, I had forgotten all about my surroundings by the time McDonald was whirling a mop around and keeping a kid trapped in his chair using only his thumb to demonstrate centre of gravity. And he was just getting started. Although the talk was too long at nearly 2 hours, it was worth the wait to see video of McDonald’s adventures in weightless flight at the end. His imaginative pitch for the space tourism industry was another highlight. I was hooked at his concept for a giant rotating space hotel. If we put a cylindrical swimming pool smack in the middle, the water would stick to the outer walls by centripetal forces. You could literally fly around in the air at the zero-gravity centre and dive down in any direction to the water below.

McDonald mentioned something in his explanation of how to make a better paper airplane that brought up an old problem for me.

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Groupthink

Which animal would use Facebook most, if it could?

My poll in class last week was a popular one – a fact that I couldn’t properly enjoy, since Charlie came up with it for me in a fit of brain-dead incapacity. Charlie’s Facebook question elicited chirps of excitement, compliments and even a few drawings on the response sheets. Here are the results, ranked by favour among the students:

  • Chimpanzees: So they have opposable thumbs, and can “use the spacebar” (is this actually important in Facebook?). A number of students gave bonobos special mention, since they would probably want to keep track of all their casual sexual relationships.
  • Dolphins: Highly intelligent, social, and they might also be interested in monitoring multiple sexual conquests. Dolphins and migratory whales could use Facebook to keep in touch while roaming widely over the oceans – the long-distance relationships of the animal kingdom. For some reason, students in different tutorial groups who chose dolphins were inspired to draw them for me as well. Coincidence?
  • Parrots and other birds: Especially in species that have high levels of extra-pair paternity, birds could use Facebook as a form of mate-guarding to keep tabs on their social partner1,2. There are other reasons to think that songbirds might easily make the transition to internet gossip. Female black-capped chickadees, for instance, eavesdrop on the outcome of song contests between rival males, and use this information when deciding on a mate3.
  • Eusocial animals: Like ants or naked mole rats (the only known eusocial mammal). A couple of students also mentioned highly social meerkats, since living in groups of 10-40 individuals would require them to keep track of a lot of social information.
  • Other yappy follower-types: hyenas, seals, lemmings, and Yorkshire terriers all got a mention.

Charlie and I discussed it over dinner at the Iron Duke. My first thought went to ants, for their extreme group lifestyle. The problem is that ants don’t really care about what other ants do or think about each other. Insect sociality is all about the greater good: worker ants toil away for the colony despite having no hope of reproducing on their own. Ok, so maybe the internet isn’t conducive to real reproduction either, but ants just don’t have the ego required. Plus, as one clever student pointed out, a colony of eusocial animals are all very close genetic relatives of one another – and she tends to block family members from Facebook.

Charlie mentioned peacocks for spending so much time on courtship and preening, but I rejected that one too.

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